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Page 1
Dense optical flow software to quantify cellular contractility.
Cell Rep Methods. 2021 Jul 7;1(4):100044. doi: 10.1016/j.crmeth.2021.100044. eCollection 2021 Aug 23.
Cell Rep Methods. 2021.
PMID: 35475144
Free PMC article.
PFstats: A Network-Based Open Tool for Protein Family Analysis.
Fonseca-Júnior NJ, Afonso MQL, Oliveira LC, Bleicher L.
Fonseca-Júnior NJ, et al. Among authors: afonso mql.
J Comput Biol. 2018 May;25(5):480-486. doi: 10.1089/cmb.2017.0181. Epub 2018 Feb 26.
J Comput Biol. 2018.
PMID: 29481292
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Naview: A d3.js Based JavaScript Library for Drawing and Annotating Voltage-Gated Sodium Channels Membrane Diagrams.
Afonso MQL, da Fonseca Júnior NJ, Miranda TG, Bleicher L.
Afonso MQL, et al.
Front Bioinform. 2022 Feb 11;2:774417. doi: 10.3389/fbinf.2022.774417. eCollection 2022.
Front Bioinform. 2022.
PMID: 36304314
Free PMC article.
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PDBe and PDBe-KB: Providing high-quality, up-to-date and integrated resources of macromolecular structures to support basic and applied research and education.
Varadi M, Anyango S, Appasamy SD, Armstrong D, Bage M, Berrisford J, Choudhary P, Bertoni D, Deshpande M, Leines GD, Ellaway J, Evans G, Gaborova R, Gupta D, Gutmanas A, Harrus D, Kleywegt GJ, Bueno WM, Nadzirin N, Nair S, Pravda L, Afonso MQL, Sehnal D, Tanweer A, Tolchard J, Abrams C, Dunlop R, Velankar S.
Varadi M, et al.
Protein Sci. 2022 Oct;31(10):e4439. doi: 10.1002/pro.4439.
Protein Sci. 2022.
PMID: 36173162
Free PMC article.
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A new method bridging graph theory and residue co-evolutionary networks for specificity determinant positions detection.
da Fonseca NJ, Afonso MQL, de Oliveira LC, Bleicher L.
da Fonseca NJ, et al.
Bioinformatics. 2019 May 1;35(9):1478-1485. doi: 10.1093/bioinformatics/bty846.
Bioinformatics. 2019.
PMID: 30295749
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Residue correlation networks in nuclear receptors reflect functional specialization and the formation of the nematode-specific P-box.
Afonso MQ, de Lima LH, Bleicher L.
Afonso MQ, et al.
BMC Genomics. 2013;14 Suppl 6(Suppl 6):S1. doi: 10.1186/1471-2164-14-S6-S1. Epub 2013 Oct 25.
BMC Genomics. 2013.
PMID: 24564869
Free PMC article.
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